MolNFT v1 · #241551 · protein
AlphaFold monomer V2.0 prediction for helicase protein MOM1 (Q9M658)
Q9M658: “AlphaFold monomer V2.0 prediction for helicase protein MOM1 (Q9M658)”. 10 pockets (best druggability 0.67). MolNFT v1 #241551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9M658
- Type
- protein
- Length
- 2,001 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Helicase protein MOM1
- UniProt
- Q9M658
- Pockets
- 10 · best druggability 0.67
Structure
1 distinct chain · 24% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Helicase protein MOM1 | protein | 2001 | 24% helix, 2% strand | Q9M658 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 597 | 0.67 | 0.76 | 48 | empty |
| 2 | 233 | 0.55 | 0.77 | 38 | empty |
| 3 | 183 | 0.52 | 0.78 | 28 | empty |
| 4 | 202 | 0.50 | 0.76 | 24 | empty |
| 5 | 217 | 0.50 | 0.75 | 26 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3VEM · Structural basis of transcriptional gene silencing mediated by Arabidopsis MOM1 · an experimental structure of the same protein · chain A against A, TM-score 0.04
- 3VEM · Structural basis of transcriptional gene silencing mediated by arabidopsis MOM1 · an experimental structure of the same protein · chain A against A, TM-score 0.04
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9M658
- Elsewhere: UniProt Q9M658 · AlphaFold DB Q9M658
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