MolNFT v1 · #238851 · protein
AlphaFold monomer V2.0 prediction for tRNA modification GTPase mnme (Q8YN91)
Q8YN91: “AlphaFold monomer V2.0 prediction for tRNA modification GTPase mnme (Q8YN91)”. 5 pockets (best druggability 0.57). MolNFT v1 #238851 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8YN91
- Type
- protein
- Length
- 459 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x58cbba95a543954Ec48b693257966aFbEE57af84
- Molecule
- TRNA modification GTPase mnme
- UniProt
- Q8YN91
- Pockets
- 5 · best druggability 0.57
Structure
1 distinct chain · 46% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA modification GTPase mnme | protein | 459 | 46% helix, 16% strand | Q8YN91 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 186 | 0.57 | 0.81 | 34 | empty |
| 2 | 132 | 0.50 | 0.80 | 30 | empty |
| 3 | 101 | 0.35 | 0.74 | 20 | empty |
| 4 | 56 | 0.27 | 0.73 | 14 | empty |
| 5 | 55 | 0.27 | 0.73 | 11 | empty |
Compared structures
- 3GEH · Crystal structure of mnme from nostoc in complex with GDP, folinic acid and zn · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 3GEH · Crystal structure of MnmE from Nostoc in complex with GDP, FOLINIC ACID and ZN · an experimental structure of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YN91
- Elsewhere: UniProt Q8YN91 · AlphaFold DB Q8YN91
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