Research workbench

HLA32393 A*02:1025

Analyse HLA32393 A*02:1025 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1025
Type: protein
Length: 365 residues
Chains: 1
Collection: MolNFT HLA
Contract: 0xf8a9A5fC2cEA6dcA15e5E45712A48a33A7bB25FC
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Pockets: 3 · best druggability 0.72

Structure

1 distinct chain · 29% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	365	29% helix, 31% strand	—

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	958	0.72	0.76	81	empty
2	66	0.40	0.79	18	empty
3	68	0.35	0.77	14	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1025 · HLA35560 C*07:1025 · the same entry in another collection · chain A against A, TM-score 0.85
1025 · HLA24259 DPB1*1025:01 · the same entry in another collection · chain A against A, TM-score 0.42

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1025 · PDBe 1025

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