Research workbench
HLA23936 DQB1*03:400N
Analyse HLA23936 DQB1*03:400N in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 400N
- Type
- protein
- Length
- 180 residues
- Chains
- 1
- Collection
- MolNFT HLA
- Contract
- 0xf8a9A5fC2cEA6dcA15e5E45712A48a33A7bB25FC
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Pockets
- 1 · best druggability 0.38
Structure
1 distinct chain · 19% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 180 | 19% helix, 27% strand | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 139 | 0.38 | 0.72 | 22 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 400N · HLA30863 A*11:400N · the same entry in another collection · chain A against A, TM-score 0.63
- 400N · HLA15406 B*15:400N · the same entry in another collection · chain A against A, TM-score 0.41
- 400N · HLA29434 A*03:400N · the same entry in another collection · chain A against A, TM-score 0.32
- 400N · HLA32874 A*01:400N · the same entry in another collection · chain A against A, TM-score 0.26
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 400N · PDBe 400N
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