Research workbench
HLA23587 C*01:181N
Analyse HLA23587 C*01:181N in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 181N
- Type
- protein
- Length
- 276 residues
- Chains
- 1
- Collection
- MolNFT HLA
- Contract
- 0xf8a9A5fC2cEA6dcA15e5E45712A48a33A7bB25FC
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Pockets
- 4 · best druggability 0.45
Structure
1 distinct chain · 25% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 276 | 25% helix, 34% strand | — |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.45 | 0.80 | 18 | empty |
| 2 | 69 | 0.34 | 0.76 | 18 | empty |
| 3 | 88 | 0.33 | 0.75 | 14 | empty |
| 4 | 50 | 0.30 | 0.76 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 181N · HLA19512 A*68:181N · the same entry in another collection · chain A against A, TM-score 0.58
- 181N · HLA04457 B*15:181N · the same entry in another collection · chain A against A, TM-score 0.50
- 181N · HLA22618 C*08:181N · the same entry in another collection · chain A against A, TM-score 0.31
- 181N · HLA09009 B*07:181N · the same entry in another collection · chain A against A, TM-score 0.22
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 181N · PDBe 181N
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