Research workbench
HLA17877 C*06:208N
Analyse HLA17877 C*06:208N in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 208N
- Type
- protein
- Length
- 169 residues
- Chains
- 1
- Collection
- MolNFT HLA
- Contract
- 0xf8a9A5fC2cEA6dcA15e5E45712A48a33A7bB25FC
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Pockets
- 1 · best druggability 0.52
Structure
1 distinct chain · 36% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 169 | 36% helix, 33% strand | — |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 147 | 0.52 | 0.79 | 25 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 208N · HLA22430 C*05:208N · the same entry in another collection · chain A against A, TM-score 0.86
- 208N · HLA26829 C*08:208N · the same entry in another collection · chain A against A, TM-score 0.67
- 208N · HLA09970 C*03:208N · the same entry in another collection · chain A against A, TM-score 0.36
- 208N · HLA22389 DQB1*05:208N · the same entry in another collection · chain A against A, TM-score 0.02
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 208N · PDBe 208N
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.