Research workbench
Structure of the C ring of the CF1FO ATP synthases.
Analyse Structure of the C ring of the CF1FO ATP synthases. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4MJN
- Type
- protein
- Length
- 1,036 residues
- Chains
- 14
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ATP synthase subunit C, chloroplastic
- EC
- 3.6.3.14
- UniProt
- P69448
- Pockets
- 9 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 89% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I, J, K, L, M, N | ATP synthase subunit C, chloroplastic (EC 3.6.3.14) | protein | 74 | 89% helix, 0% strand | P69448 |
Pockets
9 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 886 | 0.78 | 0.81 | 154 | empty |
| 2 | 836 | 0.77 | 0.81 | 154 | empty |
| 3 | 653 | 0.73 | 0.80 | 106 | empty |
| 4 | 560 | 0.72 | 0.80 | 111 | empty |
| 5 | 353 | 0.66 | 0.80 | 72 | empty |
Interfaces
14 interfaces between chains.
- A–B · 1389 Ų buried · 30 hydrogen bonds · protein-protein
- I–J · 1222 Ų buried · 5 hydrogen bonds · protein-protein
- L–M · 1212 Ų buried · 10 hydrogen bonds · protein-protein
- D–E · 1117 Ų buried · 11 hydrogen bonds · protein-protein
- G–H · 1038 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 4MJN · Structure of the c ring of the CF1FO ATP synthases. · the same entry in another collection · chain J against J, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69448
- Elsewhere: RCSB PDB 4MJN · PDBe 4MJN · UniProt P69448
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.