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Crystal structure of ectd from S. alaskensis in its apoform

Analyse Crystal structure of ectd from S. alaskensis in its apoform in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4MHR
Type: protein
Length: 280 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ectoine hydroxylase
UniProt: Q1GNW5
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ectoine hydroxylase	protein	280	30% helix, 24% strand	Q1GNW5

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	378	0.70	0.82	47	empty

Compared structures

4MHR · Crystal structure of EctD from S. alaskensis in its apoform · the same entry in another collection · chain A against A, TM-score 1.00
Q1GNW5 · AlphaFold monomer V2.0 prediction for ectoine dioxygenase (Q1GNW5) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q1GNW5
Elsewhere: RCSB PDB 4MHR · PDBe 4MHR · UniProt Q1GNW5

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