Research workbench
Cubic crystal form of PIR1 dual specificity phosphatase core
Analyse Cubic crystal form of PIR1 dual specificity phosphatase core in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4MBB
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA/RNP complex-1-interacting phosphatase
- EC
- 3.1.3.-
- UniProt
- O75319
- Ligands
- CL, PO4
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA/RNP complex-1-interacting phosphatase (EC 3.1.3.-) | protein | 184 | 42% helix, 10% strand | O75319 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 89 | 0.37 | 0.76 | 23 | PO4 |
Compared structures
- 4MBB · Cubic crystal form of PIR1 dual specificity phosphatase core · the same entry in another collection · chain A against A, TM-score 1.00
- O75319 · AlphaFold monomer V2.0 prediction for RNA/RNP complex-1-interacting phosphatase (O75319) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O75319
- Elsewhere: RCSB PDB 4MBB · PDBe 4MBB · UniProt O75319
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