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Crystal structure of a gnat superfamily acetyltransferase PA4794 in complex with hepes

Analyse Crystal structure of a gnat superfamily acetyltransferase PA4794 in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4M3S
Type
protein
Length
160 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Uncharacterized protein
UniProt
Q9HV14
Ligands
CL, SO4
Pockets
1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 37% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AUncharacterized proteinprotein16034% helix, 37% strandQ9HV14

Ligands and binding sites

  • CL · Chloride ion · ion · 4 copies · chains A
  • SO4 · Sulfate ion · ion · 2 copies · chains A
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
13080.650.8137CL, EPE

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

  • 4M3S · Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with HEPES · the same entry in another collection · chain A against A, TM-score 1.00

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