Research workbench
Structure of the thermus thermophilus 30S ribosomal subunit in complex with a messenger RNA fragment and cognate transfer RNA anticodon stem-loop bound at the a site and with the antibiotic paromomycin
Analyse Structure of the thermus thermophilus 30S ribosomal subunit in complex with a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1IBL
- Type
- protein + RNA
- Length
- 3,925 residues
- Chains
- 24
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P80373, P27152, P23370, P17291, P24319, P80375, P17293, P24320, P80378, P80381, P32193
Structure
x-ray diffraction · 24 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 1507 | — | — |
| X | — | rna | 6 | — | — |
| Y | — | rna | 15 | — | — |
| Z | — | rna | 4 | — | — |
| B | — | protein | 234 | — | — |
| C | — | protein | 206 | — | — |
| D | — | protein | 208 | — | P80373 |
| E | — | protein | 150 | — | P27152 |
| F | — | protein | 101 | — | P23370 |
| G | — | protein | 155 | — | P17291 |
| H | — | protein | 138 | — | P24319 |
| I | — | protein | 127 | — | — |
| J | — | protein | 98 | — | P80375 |
| K | — | protein | 119 | — | — |
| L | — | protein | 124 | — | P17293 |
| M | — | protein | 118 | — | — |
| N | — | protein | 60 | — | P24320 |
| O | — | protein | 88 | — | P80378 |
| P | — | protein | 83 | — | — |
| Q | — | protein | 104 | — | — |
| R | — | protein | 73 | — | — |
| S | — | protein | 84 | — | P80381 |
| T | — | protein | 99 | — | — |
| V | — | protein | 24 | — | P32193 |
Compared structures
- 1IBL · Structure of the thermus thermophilus 30S ribosomal subunit in complex with a messenger… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80373
- Every structure of UniProt P27152
- Every structure of UniProt P23370
- Every structure of UniProt P17291
- Every structure of UniProt P24319
- Every structure of UniProt P80375
- Every structure of UniProt P17293
- Every structure of UniProt P24320
- Every structure of UniProt P80378
- Every structure of UniProt P80381
- Every structure of UniProt P32193
- Elsewhere: RCSB PDB 1IBL · PDBe 1IBL · UniProt P80373 · UniProt P27152 · UniProt P23370 · UniProt P17291 · UniProt P24319 · UniProt P80375 · UniProt P17293 · UniProt P24320 · UniProt P80378 · UniProt P80381 · UniProt P32193
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