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Solution structure of F35Y mutant of rat ferro cytochrome B5, a conformation, ensemble of 20 structures

Analyse Solution structure of F35Y mutant of rat ferro cytochrome B5, a conformation… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IB7
Type: protein
Length: 85 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cytochrome B5
UniProt: P00173
Ligands: HEM
Pockets: 1 · best druggability 0.61

Structure

solution nmr · 1 distinct chain · 33% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cytochrome B5	protein	85	33% helix, 15% strand	P00173

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	77	0.61	0.89	21	HEM

Compared structures

1IB7 · Solution structure of F35Y mutant of rat ferro cytochrome B5, a conformation, ensemble of… · the same entry in another collection · chain A against A, TM-score 1.00
P00173 · AlphaFold monomer V2.0 prediction for cytochrome B5 (P00173) · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00173
Elsewhere: RCSB PDB 1IB7 · PDBe 1IB7 · UniProt P00173

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