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Structure of the N-terminal domain of the FLO1 adhesin (N-FLO1P) from the yeast saccharomyces cerevisiae

Analyse Structure of the N-terminal domain of the FLO1 adhesin (N-FLO1P) from the yeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4LHL
Type: protein
Length: 248 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flocculation protein FLO1
UniProt: P32768
Ligands: NA
Pockets: 1 · best druggability 0.29

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Flocculation protein FLO1	protein	248	7% helix, 40% strand	P32768

Ligands and binding sites

NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	54	0.29	0.76	21	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

4LHL · Structure of the N-terminal domain of the Flo1 adhesin (N-Flo1p) from the yeast… · the same entry in another collection · chain A against A, TM-score 1.00
P32768 · AlphaFold monomer V2.0 prediction for flocculation protein FLO1 (P32768) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P32768
Elsewhere: RCSB PDB 4LHL · PDBe 4LHL · UniProt P32768

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