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Crystal structure of sulfolobus solfataricus VPS4

Analyse Crystal structure of sulfolobus solfataricus VPS4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4LGM
Type: protein
Length: 251 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: VPS4 aaa ATPase
EC: 3.6.4.6
UniProt: Q97ZJ7
Ligands: CL
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	VPS4 aaa ATPase (EC 3.6.4.6)	protein	251	51% helix, 12% strand	Q97ZJ7

Ligands and binding sites

CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	149	0.51	0.79	21	empty

Compared structures

4LGM · Crystal Structure of Sulfolobus solfataricus Vps4 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97ZJ7
Elsewhere: RCSB PDB 4LGM · PDBe 4LGM · UniProt Q97ZJ7

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