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Crystal structure of (1R,4R)-4-{4-[7-amino-2-(1,2,3-benzothiadiazol-7- yl)-3-CHLOROFURO[2,3-C]PYRIDIN-4-yl]-1H-pyrazol-1-YL}CYCLOHEXAN-1-ol bound to TAK1-TAB1

Analyse Crystal structure of (1R,4R)-4-{4-[7-amino-2-(1,2,3-benzothiadiazol-7… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4L53
Type
protein
Length
296 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Mitogen-activated protein kinase kinase kinase 7, TGF-beta- activated kinase 1 and…
EC
2.7.11.25
UniProt
O43318, Q15750
Ligands
1UO
Pockets
3 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 16% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMitogen-activated protein kinase kinase kinase 7, TGF-beta- activated kinase 1 and MAP3K7-binding protein 1 chimera (EC 2.7.11.25)protein29640% helix, 16% strandO43318, Q15750

Ligands and binding sites

  • 1UO · trans-4-{4-[7-amino-2-(1,2,3-benzothiadiazol-7-yl)-3-chlorofuro[2,3-c]pyridin-4-yl]-1H-pyrazol-1-yl}cyclohexanol · ligand · chains A
  • EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11690.620.84241UO
21590.440.7527empty
3700.310.7420empty

Compared structures

  • 4L53 · Crystal Structure of (1R,4R)-4-{4-[7-amino-2-(1,2,3-benzothiadiazol-7-yl)-3-chlorofuro[2,3… · the same entry in another collection · chain A against A, TM-score 1.00
  • O43318 · AlphaFold monomer V2.0 prediction for mitogen-activated protein kinase kinase kinase 7… · a predicted model of the same protein · chain A against A, TM-score 0.93
  • Q15750 · AlphaFold monomer V2.0 prediction for TGF-beta-activated kinase 1 and MAP3K7-binding… · a predicted model of the same protein · chain A against A, TM-score 0.32

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