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Structure of cyanide and camphor bound P450CAM mutant L358A

Analyse Structure of cyanide and camphor bound P450CAM mutant L358A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4L4D
Type
protein
Length
405 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Camphor 5-monooxygenase
EC
1.14.15.1
UniProt
P00183
Ligands
HEM, CAM, K, CYN
Pockets
2 · best druggability 0.86

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 10% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACamphor 5-monooxygenase (EC 1.14.15.1)protein40552% helix, 10% strandP00183

Ligands and binding sites

  • HEM · Protoporphyrin IX containing Fe · ligand · chains A
  • CAM · Camphor · ligand · chains A
  • K · Potassium ion · metal · 2 copies · chains A
  • CYN · Cyanide ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
14220.860.9451HEM, CYN, CAM
2940.420.7917empty

Compared structures

  • 4L4D · Structure of cyanide and camphor bound P450cam mutant L358A · the same entry in another collection · chain A against A, TM-score 1.00
  • P00183 · AlphaFold monomer V2.0 prediction for camphor 5-monooxygenase (P00183) · a predicted model of the same protein · chain A against A, TM-score 1.00

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