Research workbench
Structural insight into golgi membrane stacking by GRASP65 and GRASP55
Analyse Structural insight into golgi membrane stacking by GRASP65 and GRASP55 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4KFV
- Type
- protein
- Length
- 199 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Golgi reassembly-stacking protein 1
- UniProt
- B1WBR1
- Ligands
- ZN, CL
- Pockets
- 4 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Golgi reassembly-stacking protein 1 | protein | 199 | 15% helix, 31% strand | B1WBR1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.65 | 0.87 | 26 | ZN, CL |
| 2 | 85 | 0.33 | 0.74 | 22 | empty |
| 3 | 63 | 0.33 | 0.76 | 14 | empty |
| 4 | 67 | 0.31 | 0.74 | 13 | empty |
Compared structures
- 4KFV · Structural insight into Golgi membrane stacking by GRASP65 and GRASP55 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1WBR1
- Elsewhere: RCSB PDB 4KFV · PDBe 4KFV · UniProt B1WBR1
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