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Crystal structure of staphylococcal enterotoxin C2 at 100K crystallized at pH 6.5

Analyse Crystal structure of staphylococcal enterotoxin C2 at 100K crystallized at pH… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1I4R
Type: protein
Length: 234 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Enterotoxin type C-2
UniProt: P34071
Ligands: ZN
Pockets: 2 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 18% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Enterotoxin type C-2	protein	234	18% helix, 33% strand	P34071

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.34	0.78	12	empty
2	54	0.29	0.75	14	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1I4R · Crystal structure of staphylococcal enterotoxin C2 at 100K crystallized at pH 6.5 · the same entry in another collection · chain A against A, TM-score 1.00
P34071 · AlphaFold monomer V2.0 prediction for enterotoxin type C-2 (P34071) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P34071
Elsewhere: RCSB PDB 1I4R · PDBe 1I4R · UniProt P34071

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