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Crystal structure of BAP31 vded at acidic pH

Analyse Crystal structure of BAP31 vded at acidic pH in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4JZP
Type: protein
Length: 102 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: B-cell receptor-associated protein 31
UniProt: P51572
Ligands: SO4

Structure

x-ray diffraction · 2 distinct chains · 94% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	B-cell receptor-associated protein 31	protein	52	96% helix, 0% strand	P51572
B	B-cell receptor-associated protein 31	protein	50	92% helix, 0% strand	P51572

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A, B
PG4 · Tetraethylene glycol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 1286 Å² buried · 4 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

4JZP · Crystal structure of BAP31 vDED at acidic pH · the same entry in another collection · chain A against A, TM-score 1.00
P51572 · AlphaFold monomer V2.0 prediction for B-cell receptor-associated protein 31 (P51572) · a predicted model of the same protein · chain B against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P51572
Elsewhere: RCSB PDB 4JZP · PDBe 4JZP · UniProt P51572

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