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Crystal structure of BAP31 vded at alkaline pH

Analyse Crystal structure of BAP31 vded at alkaline pH in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4JZL
Type: protein
Length: 246 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: B-cell receptor-associated protein 31
UniProt: P51572

Structure

x-ray diffraction · 2 distinct chains · 94% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	B-cell receptor-associated protein 31	protein	62	95% helix, 0% strand	P51572
B, D	B-cell receptor-associated protein 31	protein	61	93% helix, 0% strand	P51572

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

3 interfaces between chains.

B–C · 1597 Å² buried · 3 hydrogen bonds · protein-protein
A–D · 1579 Å² buried · 5 hydrogen bonds · protein-protein
A–C · 41 Å² buried · 0 hydrogen bonds · protein-protein

Compared structures

4JZL · Crystal structure of BAP31 vDED at alkaline pH · the same entry in another collection · chain D against D, TM-score 1.00
P51572 · AlphaFold monomer V2.0 prediction for B-cell receptor-associated protein 31 (P51572) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P51572
Elsewhere: RCSB PDB 4JZL · PDBe 4JZL · UniProt P51572

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