Research workbench
Crystal structure of ld transpeptidase LDTMT1 from M. tuberculosis
Analyse Crystal structure of ld transpeptidase LDTMT1 from M. tuberculosis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4JMN
- Type
- protein
- Length
- 216 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable L,D-transpeptidase ldta
- UniProt
- L0T5Q5
- Pockets
- 1 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable L,D-transpeptidase ldta | protein | 216 | 11% helix, 45% strand | L0T5Q5 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 109 | 0.40 | 0.76 | 26 | empty |
Compared structures
- 4JMN · Crystal structure of LD transpeptidase LdtMt1 from M. tuberculosis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L0T5Q5
- Elsewhere: RCSB PDB 4JMN · PDBe 4JMN · UniProt L0T5Q5
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