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Crystal structure of the dual-domain ggdef-eal module of fimx from pseudomonas aeruginosa
Analyse Crystal structure of the dual-domain ggdef-eal module of fimx from pseudomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4J40
- Type
- protein
- Length
- 502 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fimx
- EC
- 3.1.4.52
- UniProt
- Q9HUK6
- Pockets
- 2 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Fimx (EC 3.1.4.52) | protein | 251 | 43% helix, 20% strand | Q9HUK6 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 598 | 0.75 | 0.82 | 63 | empty |
| 2 | 410 | 0.71 | 0.82 | 42 | empty |
Interfaces
1 interface between chains.
- A–B · 1750 Ų buried · 32 hydrogen bonds · protein-protein
Compared structures
- 4J40 · Crystal structure of the dual-domain GGDEF-EAL module of FimX from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HUK6
- Elsewhere: RCSB PDB 4J40 · PDBe 4J40 · UniProt Q9HUK6
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