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Crystal structure of mouse major urinary protein (mup-I) complexed with sec-butyl-thiazoline

Analyse Crystal structure of mouse major urinary protein (mup-I) complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1I06
Type
protein
Length
156 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Major urinary protein I
UniProt
P02762
Ligands
TZL, CD
Pockets
1 · best druggability 0.83

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 47% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMajor urinary protein Iprotein15615% helix, 47% strandP02762

Ligands and binding sites

  • TZL · 2-(sec-butyl)thiazole · ligand · chains A
  • CD · Cadmium ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11380.830.9824TZL

Compared structures

  • 1I06 · Crystal structure of mouse major urinary protein (mup-I) complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
  • P02762 · AlphaFold monomer V2.0 prediction for major urinary protein 6 (P02762) · a predicted model of the same protein · chain A against A, TM-score 0.98

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