Research workbench
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 3 from saccharomyces cerevisiae
Analyse Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 3 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4IQ8
- Type
- protein
- Length
- 331 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glyceraldehyde-3-phosphate dehydrogenase 3
- EC
- 1.2.1.12
- UniProt
- P00359
- Pockets
- 1 · best druggability 0.58
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12) | protein | 331 | 29% helix, 27% strand | P00359 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 393 | 0.58 | 0.75 | 36 | empty |
Compared structures
- 4IQ8 · Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 3 from Saccharomyces… · the same entry in another collection · chain A against A, TM-score 1.00
- P00359 · AlphaFold monomer V2.0 prediction for glyceraldehyde-3-phosphate dehydrogenase 3 (P00359) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00359
- Elsewhere: RCSB PDB 4IQ8 · PDBe 4IQ8 · UniProt P00359
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