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Crystal structure of the collagen VI ALPHA3 N5 domain

Analyse Crystal structure of the collagen VI ALPHA3 N5 domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4IGI
Type: protein
Length: 197 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Collagen ALPHA3(VI)
UniProt: Q9Z0I9
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Collagen ALPHA3(VI)	protein	197	43% helix, 20% strand	Q9Z0I9

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	70	0.30	0.74	16	empty

Compared structures

4IGI · Crystal structure of the Collagen VI alpha3 N5 domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Z0I9
Elsewhere: RCSB PDB 4IGI · PDBe 4IGI · UniProt Q9Z0I9

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