GL1X · GenesisL1 explorer

Research workbench

Crystal structure of teas C440W

Analyse Crystal structure of teas C440W in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1HXC
Type
protein
Length
516 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
5-epi-aristolochene synthase
EC
4.1.99.7
UniProt
Q40577
Ligands
FHP
Pockets
6 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 73% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A5-epi-aristolochene synthase (EC 4.1.99.7)protein51673% helix, 0% strandQ40577

Ligands and binding sites

  • FHP · 1-hydroxy-3,7,11-trimethyldodeca-2,6,10-triene phosphonic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
14770.800.8739empty
25660.750.8257FHP
32390.560.7825empty
41960.490.7626empty
5710.460.8317empty

Compared structures

  • 1HXC · Crystal structure of teas C440W · the same entry in another collection · chain A against A, TM-score 1.00
  • Q40577 · AlphaFold monomer V2.0 prediction for 5-epi-aristolochene synthase (Q40577) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.