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Structure of the bacteriophage T4 tail terminator protein, GP15.

Analyse Structure of the bacteriophage T4 tail terminator protein, GP15. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4HUD
Type: protein
Length: 1,266 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tail connector protein GP15
UniProt: P11112
Pockets: 17 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E, F	Tail connector protein GP15	protein	211	25% helix, 40% strand	P11112

Pockets

17 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	628	0.71	0.79	70	empty
2	601	0.71	0.79	66	empty
3	457	0.67	0.79	45	empty
4	426	0.67	0.79	47	empty
5	438	0.66	0.79	43	empty

Interfaces

6 interfaces between chains.

A–B · 1198 Å² buried · 15 hydrogen bonds · protein-protein
A–F · 1196 Å² buried · 12 hydrogen bonds · protein-protein
E–F · 1195 Å² buried · 13 hydrogen bonds · protein-protein
C–D · 1188 Å² buried · 11 hydrogen bonds · protein-protein
B–C · 1186 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

4HUD · Structure of the bacteriophage T4 tail terminator protein, gp15. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P11112
Elsewhere: RCSB PDB 4HUD · PDBe 4HUD · UniProt P11112

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