Research workbench
Structure of the cooa pilin subunit from enterotoxigenic escherichia COLI
Analyse Structure of the cooa pilin subunit from enterotoxigenic escherichia COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4HJI
- Type
- protein
- Length
- 307 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CS1 fimbrial subunit a
- UniProt
- P0ABW7
- Ligands
- NA
- Pockets
- 2 · best druggability 0.50
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CS1 fimbrial subunit a | protein | 154 | 5% helix, 54% strand | P0ABW7 |
| B | CS1 fimbrial subunit a | protein | 153 | 5% helix, 54% strand | P0ABW7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 223 | 0.50 | 0.75 | 26 | empty |
| 2 | 189 | 0.48 | 0.76 | 25 | empty |
Interfaces
1 interface between chains.
- A–B · 601 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 4HJI · Structure of the CooA pilin subunit from enterotoxigenic Escherichia coli · the same entry in another collection · chain A against A, TM-score 1.00
- P0ABW7 · AlphaFold monomer V2.0 prediction for CS1 fimbrial subunit a (P0ABW7) · a predicted model of the same protein · chain B against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ABW7
- Elsewhere: RCSB PDB 4HJI · PDBe 4HJI · UniProt P0ABW7
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