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Solution structure of yeast elongin C in complex with a von hippel- lindau peptide

Analyse Solution structure of yeast elongin C in complex with a von hippel- lindau… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1HV2
Type: protein
Length: 114 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Elongin C; Von hippel-lindau disease tumor suppressor
UniProt: Q03071, P40338

Structure

solution nmr · 2 distinct chains · 52% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Elongin C	protein	99	46% helix, 16% strand	Q03071
B	Von hippel-lindau disease tumor suppressor	protein	15	87% helix, 0% strand	P40338

Interfaces

1 interface between chains.

A–B · 514 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

1HV2 · Solution structure of yeast elongin C in complex with a von hippel-lindau peptide · the same entry in another collection · chain A against A, TM-score 1.00
P40338 · AlphaFold monomer V2.0 prediction for von hippel-lindau disease tumor suppressor (P40338) · a predicted model of the same protein · chain B against A, TM-score 0.85
Q03071 · AlphaFold monomer V2.0 prediction for elongin-C (Q03071) · a predicted model of the same protein · chain A against A, TM-score 0.82

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q03071
Every structure of UniProt P40338
Elsewhere: RCSB PDB 1HV2 · PDBe 1HV2 · UniProt Q03071 · UniProt P40338

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