Research workbench
DNA-binding protein hu from bacillus stearothermophilus
Analyse DNA-binding protein hu from bacillus stearothermophilus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1HUU
- Type
- protein
- Length
- 225 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein hu
- UniProt
- P02346
- Pockets
- 1 · best druggability 0.28
Structure
x-ray diffraction · 3 distinct chains · 52% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein hu | protein | 80 | 49% helix, 26% strand | P02346 |
| B | Protein hu | protein | 74 | 53% helix, 26% strand | P02346 |
| C | Protein hu | protein | 71 | 55% helix, 21% strand | P02346 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 66 | 0.28 | 0.73 | 18 | empty |
Interfaces
2 interfaces between chains.
- B–C · 223 Ų buried · 1 hydrogen bond · protein-protein
- A–C · 171 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 1HUU · DNA-binding protein hu from bacillus stearothermophilus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02346
- Elsewhere: RCSB PDB 1HUU · PDBe 1HUU · UniProt P02346
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