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Crystal structure of a putative secreted protein (BDI_1231) from parabacteroides distasonis atcc 8503 at 2.00 a resolution

Analyse Crystal structure of a putative secreted protein (BDI_1231) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4H3W
Type: protein
Length: 625 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein
UniProt: A6LBC8
Pockets: 1 · best druggability 0.67

Structure

x-ray diffraction · 2 distinct chains · 11% helix, 50% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein	protein	313	11% helix, 50% strand	A6LBC8
B	Hypothetical protein	protein	312	11% helix, 50% strand	A6LBC8

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	837	0.67	0.74	102	empty

Interfaces

1 interface between chains.

A–B · 505 Å² buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 68 modified (methylation, engineered).

Compared structures

4H3W · Crystal structure of a putative secreted protein (BDI_1231) from Parabacteroides… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A6LBC8
Elsewhere: RCSB PDB 4H3W · PDBe 4H3W · UniProt A6LBC8

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