Research workbench
Crystal structure of the RIO2 kinase from chaetomium thermophilum
Analyse Crystal structure of the RIO2 kinase from chaetomium thermophilum in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4GYG
- Type
- protein
- Length
- 331 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RIO2 kinase
- UniProt
- G0S5R3
- Pockets
- 5 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RIO2 kinase | protein | 331 | 42% helix, 20% strand | G0S5R3 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 392 | 0.67 | 0.80 | 45 | empty |
| 2 | 155 | 0.49 | 0.77 | 20 | empty |
| 3 | 128 | 0.45 | 0.77 | 20 | empty |
| 4 | 59 | 0.28 | 0.74 | 13 | empty |
| 5 | 51 | 0.26 | 0.74 | 15 | empty |
Compared structures
- 4GYG · Crystal structure of the Rio2 kinase from Chaetomium thermophilum · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0S5R3
- Elsewhere: RCSB PDB 4GYG · PDBe 4GYG · UniProt G0S5R3
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