Research workbench
Sulfotransferase domain from the synechococcus pcc 7002 olefin synthase
Analyse Sulfotransferase domain from the synechococcus pcc 7002 olefin synthase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4GOX
- Type
- protein
- Length
- 275 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polyketide synthase
- UniProt
- B1XKC6
- Ligands
- A3P
- Pockets
- 3 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyketide synthase | protein | 275 | 50% helix, 11% strand | B1XKC6 |
Ligands and binding sites
- A3P · Adenosine-3'-5'-diphosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 268 | 0.65 | 0.82 | 39 | A3P |
| 2 | 67 | 0.47 | 0.84 | 16 | empty |
| 3 | 69 | 0.34 | 0.76 | 17 | empty |
Compared structures
- 4GOX · Sulfotransferase Domain from the Synechococcus PCC 7002 Olefin Synthase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1XKC6
- Elsewhere: RCSB PDB 4GOX · PDBe 4GOX · UniProt B1XKC6
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