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Crystal structure of the sgta homodimerization domain

Analyse Crystal structure of the sgta homodimerization domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4GOD
Type: protein
Length: 93 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small glutamine-rich tetratricopeptide repeat-containing protein alpha
UniProt: O43765

Structure

x-ray diffraction · 2 distinct chains · 76% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	protein	47	74% helix, 0% strand	O43765
B	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	protein	46	78% helix, 0% strand	O43765

Ligands and binding sites

MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 815 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

4GOD · Crystal structure of the SGTA homodimerization domain · the same entry in another collection · chain A against A, TM-score 1.00
O43765 · AlphaFold monomer V2.0 prediction for small glutamine-rich tetratricopeptide… · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O43765
Elsewhere: RCSB PDB 4GOD · PDBe 4GOD · UniProt O43765

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