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X-ray crystal structure of a hypothetical deoxyuridine 5-triphosphate nucleotidohydrolase from mycobacterium abscessus

Analyse X-ray crystal structure of a hypothetical deoxyuridine 5-triphosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4GK6
Type: protein
Length: 136 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Deoxyuridine 5'-triphosphate nucleotidohydrolase
EC: 3.6.1.23
UniProt: B1MCW0
Ligands: CL
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	protein	136	3% helix, 36% strand	B1MCW0

Ligands and binding sites

CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.37	0.79	14	empty

Compared structures

4GK6 · X-ray crystal structure of a hypothetical deoxyuridine 5-triphosphate nucleotidohydrolase… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B1MCW0
Elsewhere: RCSB PDB 4GK6 · PDBe 4GK6 · UniProt B1MCW0

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