Research workbench
No mechanism, slma
Analyse No mechanism, slma in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4GFL
- Type
- protein
- Length
- 352 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleoid occlusion factor slma
- UniProt
- B5XTG2
- Pockets
- 5 · best druggability 0.42
Structure
x-ray diffraction · 2 distinct chains · 77% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoid occlusion factor slma | protein | 190 | 76% helix, 0% strand | B5XTG2 |
| B | Nucleoid occlusion factor slma | protein | 162 | 78% helix, 0% strand | B5XTG2 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 92 | 0.42 | 0.79 | 18 | empty |
| 2 | 67 | 0.36 | 0.78 | 18 | empty |
| 3 | 60 | 0.35 | 0.78 | 13 | empty |
| 4 | 54 | 0.34 | 0.78 | 12 | empty |
| 5 | 50 | 0.31 | 0.76 | 10 | empty |
Interfaces
1 interface between chains.
- A–B · 1609 Ų buried · 28 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5XTG2
- Elsewhere: RCSB PDB 4GFL · PDBe 4GFL · UniProt B5XTG2
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