Research workbench
Crystal structure of the N-terminal domain of the minor coat protein piii from ctxphi
Analyse Crystal structure of the N-terminal domain of the minor coat protein piii from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4G7W
- Type
- protein
- Length
- 295 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- C6RZG1
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · 3 distinct chains · 0% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein | protein | 98 | 0% helix, 37% strand | C6RZG1 |
| B | Putative uncharacterized protein | protein | 98 | 0% helix, 38% strand | C6RZG1 |
| C | Putative uncharacterized protein | protein | 99 | 0% helix, 38% strand | C6RZG1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 349 | 0.56 | 0.75 | 42 | empty |
| 2 | 177 | 0.46 | 0.75 | 18 | empty |
Interfaces
2 interfaces between chains.
- A–B · 651 Ų buried · 15 hydrogen bonds · protein-protein
- B–C · 313 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 12 disulfide, 6 modified (disulfide, engineered).
Compared structures
- 4G7W · Crystal structure of the N-terminal domain of the minor coat protein pIII from CTXphi · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6RZG1
- Elsewhere: RCSB PDB 4G7W · PDBe 4G7W · UniProt C6RZG1
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