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Structure of paem, a colicin M-like bacteriocin produced by pseudomonas aeruginosa

Analyse Structure of paem, a colicin M-like bacteriocin produced by pseudomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4G76
Type: protein
Length: 291 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phosphodiesterase
UniProt: Q1W548
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphodiesterase	protein	291	42% helix, 18% strand	Q1W548

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	77	0.37	0.77	17	empty

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

4G76 · Structure of PaeM, a colicin M-like bacteriocin produced by Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q1W548
Elsewhere: RCSB PDB 4G76 · PDBe 4G76 · UniProt Q1W548

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