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Crystal structure of protein SP_0782 (7-79) from streptococcus pneumoniae complexed with ssdna. northeast structural genomics consortium (nesg) target SPR104

Analyse Crystal structure of protein SP_0782 (7-79) from streptococcus pneumoniae… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4G06
Type: protein
Length: 136 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: Q97RM2
Ligands: DT

Structure

x-ray diffraction · 2 distinct chains · 17% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	68	19% helix, 46% strand	Q97RM2
B	Uncharacterized protein	protein	68	15% helix, 46% strand	Q97RM2

Ligands and binding sites

DT · Thymidine-5'-monophosphate · ligand · 2 copies · chains A
PEG · Di(hydroxyethyl)ether · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 966 Å² buried · 8 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

4G06 · Crystal structure of protein SP_0782 (7-79) from Streptococcus pneumoniae complexed with… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97RM2
Elsewhere: RCSB PDB 4G06 · PDBe 4G06 · UniProt Q97RM2

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