Research workbench
Crystal structure of susf from bacteroides thetaiotaomicron
Analyse Crystal structure of susf from bacteroides thetaiotaomicron in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4FE9
- Type
- protein
- Length
- 446 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein susf
- UniProt
- G8JZS6
- Ligands
- GLC, NA, PO4
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein susf | protein | 446 | 11% helix, 43% strand | G8JZS6 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 11 copies · chains A
- NA · Sodium ion · metal · chains A
- PO4 · Phosphate ion · ion
- EDO · 1,2-ethanediol · additive · 8 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 115 | 0.38 | 0.74 | 21 | EDO |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G8JZS6
- Elsewhere: RCSB PDB 4FE9 · PDBe 4FE9 · UniProt G8JZS6
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