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High-resolution X-ray structure of the tetramutant of BH1408 protein from bacillus halodurans, northeast structural genomics consortium (nesg) target BHR182
Analyse High-resolution X-ray structure of the tetramutant of BH1408 protein from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4F6A
- Type
- protein
- Length
- 312 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- BH1408 protein
- UniProt
- Q9KD11
- Ligands
- UNL
- Pockets
- 3 · best druggability 0.71
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | BH1408 protein | protein | 156 | 37% helix, 34% strand | Q9KD11 |
Ligands and binding sites
- UNL · Unknown ligand · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 485 | 0.71 | 0.81 | 42 | UNL |
| 2 | 543 | 0.70 | 0.79 | 53 | UNL |
| 3 | 83 | 0.33 | 0.74 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 2348 Ų buried · 44 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 4F6A · High-resolution x-ray Structure of the tetramutant of BH1408 protein from Bacillus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KD11
- Elsewhere: RCSB PDB 4F6A · PDBe 4F6A · UniProt Q9KD11
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