Research workbench

Neurotrophin P75NTR intracellular domain

Analyse Neurotrophin P75NTR intracellular domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4F42
Type: protein
Length: 84 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tumor necrosis factor receptor superfamily member 16
UniProt: P07174
Ligands: MNB

Structure

x-ray diffraction · 1 distinct chain · 69% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tumor necrosis factor receptor superfamily member 16	protein	84	69% helix, 2% strand	P07174

Ligands and binding sites

MNB · 5-mercapto-2-nitro-benzoic acid · ligand · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 covalent (covalent ligand).

Compared structures

4F42 · Neurotrophin p75NTR intracellular domain · the same entry in another collection · chain A against A, TM-score 1.00
P07174 · AlphaFold monomer V2.0 prediction for tumor necrosis factor receptor superfamily member… · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07174
Elsewhere: RCSB PDB 4F42 · PDBe 4F42 · UniProt P07174

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.