Research workbench
A chimera protein containing mbp fused to the C-terminal domain of the uncharacterized protein STM14_2015 from salmonella enterica
Analyse A chimera protein containing mbp fused to the C-terminal domain of the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4EXK
- Type
- protein
- Length
- 475 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maltose-binding periplasmic protein, uncharacterized protein chimera
- UniProt
- P0AEX9, D0ZI82
- Ligands
- GLC
- Pockets
- 4 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maltose-binding periplasmic protein, uncharacterized protein chimera | protein | 475 | 35% helix, 28% strand | P0AEX9, D0ZI82 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 4 copies · chains A
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 379 | 0.74 | 0.84 | 30 | GLC |
| 2 | 464 | 0.68 | 0.79 | 45 | empty |
| 3 | 88 | 0.38 | 0.76 | 18 | empty |
| 4 | 62 | 0.27 | 0.73 | 14 | empty |
Compared structures
- 4EXK · A chimera protein containing MBP fused to the C-terminal domain of the uncharacterized… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AEX9
- Every structure of UniProt D0ZI82
- Elsewhere: RCSB PDB 4EXK · PDBe 4EXK · UniProt P0AEX9 · UniProt D0ZI82
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