Research workbench
Crystal structure of the alnumycin P phosphatase alnb
Analyse Crystal structure of the alnumycin P phosphatase alnb in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4EX6
- Type
- protein
- Length
- 219 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alnb
- UniProt
- B6SEG4
- Ligands
- MG, BO3
- Pockets
- 3 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alnb | protein | 219 | 53% helix, 14% strand | B6SEG4 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 72 | 0.55 | 0.87 | 23 | empty |
| 2 | 71 | 0.37 | 0.77 | 19 | empty |
| 3 | 58 | 0.29 | 0.75 | 13 | empty |
Compared structures
- 4EX6 · Crystal structure of the alnumycin P phosphatase AlnB · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6SEG4
- Elsewhere: RCSB PDB 4EX6 · PDBe 4EX6 · UniProt B6SEG4
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