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Crystal structure of the infectious salmon anemia virus nucleoprotein
Analyse Crystal structure of the infectious salmon anemia virus nucleoprotein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4EWC
- Type
- protein
- Length
- 495 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative nucleoprotein
- UniProt
- Q91BR3
- Pockets
- 3 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative nucleoprotein | protein | 495 | 47% helix, 14% strand | Q91BR3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1197 | 0.74 | 0.77 | 107 | empty |
| 2 | 103 | 0.40 | 0.76 | 30 | empty |
| 3 | 56 | 0.32 | 0.76 | 13 | empty |
Modifications
Observed in the structure: 22 modified (engineered).
Compared structures
- 4EWC · Crystal Structure of the Infectious Salmon Anemia Virus Nucleoprotein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q91BR3
- Elsewhere: RCSB PDB 4EWC · PDBe 4EWC · UniProt Q91BR3
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