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Crystal structure of a CAIB/BAIF family protein from brucella suis

Analyse Crystal structure of a CAIB/BAIF family protein from brucella suis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4ED9
Type: protein
Length: 378 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: CAIB/BAIF family protein
UniProt: Q8G0K8
Pockets: 3 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	CAIB/BAIF family protein	protein	378	41% helix, 15% strand	Q8G0K8

Ligands and binding sites

PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A
EDO · 1,2-ethanediol · additive · 2 copies · chains A
NHE · 2-[N-cyclohexylamino]ethane sulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	127	0.52	0.81	24	empty
2	96	0.43	0.78	20	empty
3	147	0.42	0.74	30	empty

Compared structures

4ED9 · Crystal structure of a CAIB/BAIF family protein from Brucella suis · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8G0K8
Elsewhere: RCSB PDB 4ED9 · PDBe 4ED9 · UniProt Q8G0K8

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