Research workbench
Crystal structure of statistically disordered 19MER duplex P(CGG) 3C(CUG)3
Analyse Crystal structure of statistically disordered 19MER duplex P(CGG) 3C(CUG)3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4E6B
- Type
- RNA
- Length
- 16 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(P*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*CP*UP*GP*CP*UP*GP*CP*U P*G)-3'
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 5'-R(P*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*CP*UP*GP*CP*UP*GP*CP*U P*G)-3' | rna | 4 | — | — |
| F, E | 5'-R(P*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*CP*UP*GP*CP*UP*GP*CP*U P*G)-3' | rna | 4 | — | — |
Interfaces
5 interfaces between chains.
- A–B · 243 Ų buried · 22 hydrogen bonds · nucleic-nucleic
- F–E · 207 Ų buried · 22 hydrogen bonds · nucleic-nucleic
- A–F · 116 Ų buried · 6 hydrogen bonds · nucleic-nucleic
- B–E · 105 Ų buried · 3 hydrogen bonds · nucleic-nucleic
- B–F · 65 Ų buried · 2 hydrogen bonds · nucleic-nucleic
Compared structures
- 4E6B · Crystal Structure of statistically disordered 19mer duplex p(CGG)3C(CUG)3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4E6B · PDBe 4E6B
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