Research workbench
Solution structure of LNA1:RNA hybrid
Analyse Solution structure of LNA1:RNA hybrid in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1HHW
- Type
- DNA + RNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5- D(*CP*TP*GP*AP*+TLNP*AP*TP*GP*C) -3; 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5- D(*CP*TP*GP*AP*+TLNP*AP*TP*GP*C) -3 | dna | 9 | — | — |
| B | 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3 | rna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 444 Ų buried · 44 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 1HHW · Solution structure of LNA1:RNA hybrid · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1HHW · PDBe 1HHW
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