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Crystal structure of a plig-ec mutant, a periplasmic lysozyme inhibitor of G-type lysozyme from escherichia COLI

Analyse Crystal structure of a plig-ec mutant, a periplasmic lysozyme inhibitor of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4DXZ
Type
protein
Length
111 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Inhibitor of G-type lysozyme
UniProt
P76002
Ligands
NA

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 50% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AInhibitor of G-type lysozymeprotein1115% helix, 50% strandP76002

Ligands and binding sites

  • NA · Sodium ion · metal · 3 copies · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

  • 4DXZ · crystal structure of a PliG-Ec mutant, a periplasmic lysozyme inhibitor of g-type… · the same entry in another collection · chain A against A, TM-score 1.00
  • P76002 · AlphaFold monomer V2.0 prediction for inhibitor of G-type lysozyme (P76002) · a predicted model of the same protein · chain A against A, TM-score 0.99

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