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Crystal structure of phosphoribosylglycinamide formyltransferase from brucella melitensis

Analyse Crystal structure of phosphoribosylglycinamide formyltransferase from brucella… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4DS3
Type: protein
Length: 192 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phosphoribosylglycinamide formyltransferase
EC: 2.1.2.2
UniProt: Q8YGB8
Ligands: SO4, CL
Pockets: 1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	protein	192	38% helix, 22% strand	Q8YGB8

Ligands and binding sites

SO4 · Sulfate ion · ion · 3 copies · chains A
CL · Chloride ion · ion · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	277	0.52	0.74	36	GOL

Compared structures

4DS3 · Crystal Structure of Phosphoribosylglycinamide formyltransferase from Brucella melitensis · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8YGB8
Elsewhere: RCSB PDB 4DS3 · PDBe 4DS3 · UniProt Q8YGB8

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